STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM65852.1Putative Folate-binding protein YgfZ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the GcvT family. (326 aa)    
Predicted Functional Partners:
sufA
Chaperone involved in Fe-S cluster assembly; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the HesB/IscA family.
 
 
 0.720
CCM66017.1
Putative Nitrogen-fixing NifU domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.643
CCM65853.1
Putative Amine oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.523
CCM65854.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.523
CCM65855.1
Putative Cyclopropane-fatty-acyl-phospholipid synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.523
CCM65137.1
Putative Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
     
 0.468
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives; Belongs to the LipB family.
      
 0.449
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.