STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opuCAGlycine betaine/carnitine/choline/choline sulfate ABC transporter (ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; transporter. (422 aa)    
Predicted Functional Partners:
CCM66040.1
Putative Glycine betaine transport system permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.996
CCM66042.1
Putative glycine betaine/carnitine/choline ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.993
CCM63893.1
Putative Binding-protein-dependent transport systems inner membrane component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.987
CCM63891.1
Putative Glycine betaine/choline-binding protein of an ABC-type transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.986
CCM63892.1
Membrane hypothetical protein; No homology to any previously reported sequences.
 0.983
CCM66043.1
Putative osmoprotectant uptake system substrate-binding protein osmF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.981
CCM65293.1
Hypothetical protein; No homology to any previously reported sequences.
 
 0.968
modB
Molybdate transporter subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.866
CCM64945.1
Putative ABC-type transporter, integral membrane subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
      0.865
CCM65375.1
ABC transporter related.
 
     
0.763
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.