STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHK62956.1UPF0160 protein; Product derived from UniProtKB/Swiss-Prot:Q9Z862. (292 aa)    
Predicted Functional Partners:
AHK62957.1
Putative HIT-like protein; Product derived from UniProtKB/Swiss-Prot:Q9PK09.
  
    0.839
AHK62958.1
HEAT repeats family protein; Product derived from UniProtKB/Trembl:S7KU29.
  
   0.825
AHK62954.1
Hypothetical protein.
 
     0.708
AHK63605.1
Succinate dehydrogenase/Fumarate reductase transmembrane subunit; Product derived from UniProtKB/Trembl:S7JEI3.
   
    0.634
AHK62955.1
Hypothetical protein.
       0.569
AHK62935.1
Uncharacterized protein; Product derived from UniProtKB/Swiss-Prot:Q9Z840.
  
     0.488
atpE
V-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
   0.431
Your Current Organism:
Chlamydia avium
NCBI taxonomy Id: 1229831
Other names: C. avium 10DC88, Chlamydia avium 10DC88, Chlamydia sp. 10DC88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.