STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHK63054.1N-acetylmuramoyl-L-alanine amidase family protein; Product derived from UniProtKB/Trembl:S7JDA2. (263 aa)    
Predicted Functional Partners:
murE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6- diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
 
   
 0.869
AHK63392.1
Uncharacterized protein; Product derived from UniProtKB/Trembl:S7KNL0.
  
   0.717
AHK63052.1
Penicillin binding transpeptidase domain protein; Product derived from UniProtKB/Trembl:S7KNI1.
 
  
 0.629
AHK63614.1
LysM domain protein; Product derived from UniProtKB/Trembl:S7JEK2.
 
  
 0.602
rsmH
Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.542
AHK63051.1
Putative ftsL; Product derived from UniProtKB/Trembl:S7JCR3.
       0.542
hup
Putative DNA-binding protein HU; Product derived from UniProtKB/Swiss-Prot:Q9Z8C7;Gene name derived from UniProtKB/Swiss-Prot:Q9Z8C7; Belongs to the bacterial histone-like protein family.
  
    0.418
Your Current Organism:
Chlamydia avium
NCBI taxonomy Id: 1229831
Other names: C. avium 10DC88, Chlamydia avium 10DC88, Chlamydia sp. 10DC88
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.