STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPNG_05382Uncharacterized protein. (385 aa)    
Predicted Functional Partners:
VPNG_09870
Spindle pole body component.
    
  0.805
VPNG_04845
Spindle pole body component.
    
 0.749
VPNG_04564
Uncharacterized protein.
   
 0.742
VPNG_06489
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.698
VPNG_06867
Spindle pole body component.
    
 0.675
VPNG_03240
Uncharacterized protein.
    
 0.675
VPNG_03239
Spindle pole body component.
    
 0.675
VPNG_03250
Spindle pole body component.
    
 0.674
VPNG_08457
NDK domain-containing protein; Belongs to the NDK family.
    
 0.656
VPNG_04216
Uncharacterized protein.
    
 0.644
Your Current Organism:
Cytospora leucostoma
NCBI taxonomy Id: 1230097
Other names: C. leucostoma, Leucostoma leucostoma, Leucostoma persoonii, Valsa leucostoma, Valsa persoonii
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