STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPNG_03904Uncharacterized protein. (116 aa)    
Predicted Functional Partners:
VPNG_10322
Uncharacterized protein.
  
 
 0.999
VPNG_07751
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.999
VPNG_07660
Uncharacterized protein.
   
  0.999
VPNG_08121
Ribosomal_L18_c domain-containing protein.
   
 
 0.999
VPNG_06703
Uncharacterized protein.
  
 
 0.999
VPNG_06894
MRP-S28 domain-containing protein.
   
 0.999
VPNG_06182
Uncharacterized protein.
  
 
 0.999
VPNG_05155
KOW domain-containing protein.
   
 
 0.999
VPNG_05077
Uncharacterized protein.
   
 0.999
VPNG_04350
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.999
Your Current Organism:
Cytospora leucostoma
NCBI taxonomy Id: 1230097
Other names: C. leucostoma, Leucostoma leucostoma, Leucostoma persoonii, Valsa leucostoma, Valsa persoonii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.