STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPNG_01185Glucoamylase. (642 aa)    
Predicted Functional Partners:
VPNG_00008
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.960
VPNG_07925
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.945
VPNG_08121
Ribosomal_L18_c domain-containing protein.
  
 
 0.936
VPNG_03339
Ribosomal_L23eN domain-containing protein.
  
 
 0.932
VPNG_07751
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.924
VPNG_05155
KOW domain-containing protein.
  
   0.923
VPNG_03581
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
  
 0.922
VPNG_03941
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.922
VPNG_01943
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 
 0.919
VPNG_00413
Uncharacterized protein.
  
   0.919
Your Current Organism:
Cytospora leucostoma
NCBI taxonomy Id: 1230097
Other names: C. leucostoma, Leucostoma leucostoma, Leucostoma persoonii, Valsa leucostoma, Valsa persoonii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.