STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPNG_01071Rab-GAP TBC domain-containing protein. (777 aa)    
Predicted Functional Partners:
VPNG_03894
Uncharacterized protein.
    
 0.725
VPNG_00487
Uncharacterized protein.
    
 0.725
VPNG_06087
Uncharacterized protein.
    
 0.716
VPNG_07884
WW domain-containing protein.
    
 0.684
VPNG_05524
Uncharacterized protein.
    
 0.684
VPNG_01027
Uncharacterized protein.
    
 0.684
VPNG_02070
Uncharacterized protein.
    
  0.658
VPNG_05277
ANK_REP_REGION domain-containing protein.
   
  0.528
VPNG_04010
VPS9 domain-containing protein.
   
  0.528
VPNG_02211
MBOAT_2 domain-containing protein.
   
  0.528
Your Current Organism:
Cytospora leucostoma
NCBI taxonomy Id: 1230097
Other names: C. leucostoma, Leucostoma leucostoma, Leucostoma persoonii, Valsa leucostoma, Valsa persoonii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.