STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAV35_010935Sodium:solute symporter; Internal stop. (171 aa)    
Predicted Functional Partners:
AKG04847.1
CsbD family protein; Belongs to the UPF0337 (CsbD) family.
  
    0.745
AKG05093.1
TIGR01777 family protein.
  
    0.673
AKG05133.1
Hypothetical protein.
  
    0.654
AKG05782.1
Hypothetical protein.
  
    0.647
AKG04033.1
NADH-dependent alcohol dehydrogenase.
   
    0.586
AKG04961.1
GNAT family N-acetyltransferase.
   
    0.531
AKG05098.1
GNAT family N-acetyltransferase.
   
    0.531
AKG03441.1
Hypothetical protein.
  
     0.520
AKG03499.1
Hypothetical protein.
 
     0.505
AKG03331.1
Glutathione-dependent formaldehyde dehydrogenase.
  
     0.501
Your Current Organism:
Salimicrobium jeotgali
NCBI taxonomy Id: 1230341
Other names: JCM 19758, KACC 16972, S. jeotgali, Salimicrobium jeotgali Choi et al. 2014, Salimicrobium sp. MJ3, strain MJ3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.