STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTM_15508CAAX amino terminal protease; COG1266 Predicted metal-dependent membrane protease. (334 aa)    
Predicted Functional Partners:
CTM_13035
Hypothetical protein.
    
   0.768
CTM_13045
Hypothetical protein.
    
   0.768
CTM_20451
Cell wall hydrolase; COG4193 Beta- N-acetylglucosaminidase.
    
   0.768
CTM_17097
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.579
CTM_05397
ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
 
 0.550
CTM_15463
Hypothetical protein; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
     0.529
CTM_18829
Hypothetical protein; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
     0.529
CTM_06371
ABC transporter permease; COG0842 ABC-type multidrug transport system, permease component.
  
  
 0.527
CTM_19174
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
     0.516
CTM_15093
ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 
 0.508
Your Current Organism:
Clostridium tetanomorphum
NCBI taxonomy Id: 1230342
Other names: C. tetanomorphum DSM 665, Clostridium tetanomorphum DSM 665, Clostridium tetanomorphum NCIMB 11547
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.