STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSYG_2826Uncharacterized protein. (257 aa)    
Predicted Functional Partners:
RPS27B
40S ribosomal protein S27.
 
      0.642
CDC48
AAA ATPase; Belongs to the AAA ATPase family.
   
  0.574
MSYG_2391
Uncharacterized protein.
   
  0.574
MSY001_0189
Uncharacterized protein.
    
  0.563
RHO1.3
Similar to S.cerevisiae protein CDC42 (Small rho-like GTPase).
   
 
  0.562
CDC42
Small rho-like GTPase.
   
 
  0.562
MSYG_1328
Structural maintenance of chromosomes protein.
   
    0.531
MSYG_2356
Similar to S.cerevisiae protein ASF1 (Nucleosome assembly factor).
   
    0.530
SNU13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.530
MSY001_3211
Similar to S.cerevisiae protein UTP15 (Nucleolar protein).
   
    0.528
Your Current Organism:
Malassezia sympodialis
NCBI taxonomy Id: 1230383
Other names: M. sympodialis ATCC 42132, Malassezia sympodialis ATCC 42132
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