STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSYG_3616Similar to S.cerevisiae protein SNF7 (One of four subunits of the ESCRT-III complex). (222 aa)    
Predicted Functional Partners:
MSYG_1966
Similar to S.cerevisiae protein VPS24 (One of four subunits of the ESCRT-III complex).
   
 0.998
MSYG_2547
Similar to S.cerevisiae protein DID4 (Class E Vps protein of the ESCRT-III complex).
   
 0.997
MSYG_3710
Similar to S.cerevisiae protein VPS20 (Myristoylated subunit of the ESCRT-III complex).
    
 0.996
VPS4
AAA-ATPase involved in multivesicular body (MVB) protein sorting; Belongs to the AAA ATPase family.
    
 0.992
MSYG_1180
Similar to S.cerevisiae protein BRO1 (Cytoplasmic class E vacuolar protein sorting (VPS) factor).
    
 0.989
MSYG_2107
Similar to S.cerevisiae protein RIM20 (Protein involved in proteolytic activation of Rim101p).
    
 0.989
MSYG_4337
Uncharacterized protein.
    
 0.984
MSYG_2371
Similar to S.cerevisiae protein VPS60 (Protein involved in late endosome to vacuole transport).
   
0.967
DID2
Class E protein of the vacuolar protein-sorting (Vps) pathway.
    
 0.937
MSYG_2294
annotation not available
    
 0.921
Your Current Organism:
Malassezia sympodialis
NCBI taxonomy Id: 1230383
Other names: M. sympodialis ATCC 42132, Malassezia sympodialis ATCC 42132
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