STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C453_09303methylmalonyl-CoA epimerase; COG0346 Lactoylglutathione lyase and related lyases. (127 aa)    
Predicted Functional Partners:
C453_06344
COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding).
  
 0.996
C453_09328
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
 
  
 0.986
C453_06713
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
 
  
 0.985
C453_15248
propionyl-CoA carboxylase complex B chain; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
 
 0.980
C453_15363
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
 0.936
C453_11791
methylmalonyl-CoA epimerase; COG0346 Lactoylglutathione lyase and related lyases.
  
  
  0.849
C453_01897
Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
  
 
 0.783
C453_09658
propionyl-CoA carboxylase complex B chain; COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
 
 
 0.771
menE
O-succinylbenzoic acid--CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.
    
  0.642
C453_09263
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
  
  
  0.640
Your Current Organism:
Haloferax elongans
NCBI taxonomy Id: 1230453
Other names: H. elongans ATCC BAA-1513, Haloferax elongans ATCC BAA-1513, Haloferax elongans JCM 14791, Haloferax elongans SA5, Haloferax sp. SA5
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