STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C461_04977COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; overlaps another CDS with the same product name. (706 aa)    
Predicted Functional Partners:
C461_02576
NADH-ubiquinone oxidoreductase chain 49kDa; COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
 
 
 0.998
C461_04942
COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit.
 
 
 0.997
C461_04967
NADH-ubiquinone oxidoreductase chain 4L; COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit.
 
 0.997
C461_04952
Monovalent cation/proton antiporter, MnhG/PhaG subunit; COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit.
 
 
 0.996
C461_04957
COG2111 Multisubunit Na+/H+ antiporter, MnhB subunit; overlaps another CDS with the same product name.
 
 
 0.994
C461_04962
Monovalent cation/H+ antiporter subunit B; Overlaps another CDS with the same product name.
 
 
 0.991
C461_04947
COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit.
 
     0.970
C461_04982
COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit; overlaps another CDS with the same product name.
 
    
0.933
C461_02606
Proton-translocating NADH-quinone oxidoreductase, chain L; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
 
0.926
C461_09292
pH adaptation potassium efflux system protein A; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
 
0.918
Your Current Organism:
Halorubrum aidingense
NCBI taxonomy Id: 1230454
Other names: H. aidingense JCM 13560, Halorubrum aidingense JCM 13560, Halorubrum sp. 31-hong
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