STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C462_00998Sensory box protein; COG2202 FOG: PAS/PAC domain. (207 aa)    
Predicted Functional Partners:
C462_03253
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 0.650
C462_06435
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.570
C462_09187
Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
    
 0.549
C462_03104
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.492
C462_09192
Transketolase; COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit.
    
 0.488
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
    
 0.450
C462_09182
COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
    
 0.436
C462_02627
Multi-sensor signal transduction histidine kinase; COG0784 FOG: CheY-like receiver.
  
 
  0.416
Your Current Organism:
Halorubrum arcis
NCBI taxonomy Id: 1230455
Other names: H. arcis JCM 13916, Halorubrum arcis AJ201, Halorubrum arcis CGMCC 1.5343, Halorubrum arcis JCM 13916, Halorubrum sp. AJ201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.