STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C462_10822Resolvase-like protein; COG1961 Site-specific recombinases, DNA invertase Pin homologs. (446 aa)    
Predicted Functional Partners:
C462_08640
Sodium/hydrogen exchanger; COG0475 Kef-type K+ transport systems, membrane components.
   
    0.557
C462_05233
Resolvase domain-containing protein; COG1961 Site-specific recombinases, DNA invertase Pin homologs.
  
     0.458
C462_06155
Hypothetical protein.
   
    0.450
C462_15437
Nucleoside recognition domain protein; COG3366 Uncharacterized protein conserved in archaea.
   
    0.441
C462_10827
COG0582 Integrase.
     
 0.420
Your Current Organism:
Halorubrum arcis
NCBI taxonomy Id: 1230455
Other names: H. arcis JCM 13916, Halorubrum arcis AJ201, Halorubrum arcis CGMCC 1.5343, Halorubrum arcis JCM 13916, Halorubrum sp. AJ201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.