STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C484_02624COG0656 Aldo/keto reductases, related to diketogulonate reductase. (280 aa)    
Predicted Functional Partners:
C484_02619
Hypothetical protein.
       0.603
C484_06474
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
 0.600
C484_22373
COG1454 Alcohol dehydrogenase, class IV.
 
 
 0.570
C484_20577
Serine protein kinase, PrkA; COG2766 Putative Ser protein kinase.
   
    0.549
C484_20582
COG2766 Putative Ser protein kinase.
   
    0.549
C484_22138
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
0.535
C484_18542
Aryl-alcohol dehydrogenase; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
0.524
C484_02629
Geranylgeranyl reductase; COG0644 Dehydrogenases (flavoproteins).
       0.522
C484_20542
COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
 
0.521
C484_12646
2-alkenal reductase; COG2130 Putative NADP-dependent oxidoreductases.
   
 
 0.483
Your Current Organism:
Natrialba taiwanensis
NCBI taxonomy Id: 1230458
Other names: N. taiwanensis DSM 12281, Natrialba taiwanensis B1T, Natrialba taiwanensis DSM 12281, Natrialba taiwanensis JCM 9577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.