STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C207_01819Cytochrome c-type biogenesis protein CcmI. (376 aa)    
Predicted Functional Partners:
C207_01821
Cytochrome c-type biogenesis protein CycK.
 
 
 0.987
C207_01822
Cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase.
 
  
 0.958
C207_04682
Thiol:disulfide interchange protein CycY.
 
  
 0.914
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
 
  
 0.900
C207_04679
Heme exporter protein B; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
 
   
 0.792
C207_04598
Molybdate transport system ATP-binding protein.
  
  0.682
ccmC
Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
  
 0.675
C207_06942
Adenylyltransferase and sulfurtransferase.
   
 0.673
C207_07048
Acetolactate synthase I/II/III large subunit.
   
 0.673
C207_03936
Branched-chain amino acid transport system permease.
  
  0.643
Your Current Organism:
Bradyrhizobium sp. DFCI1
NCBI taxonomy Id: 1230476
Other names: B. sp. DFCI-1, Bradyrhizobium sp. DFCI-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.