STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMI_0E01200GLAMI_0E01200g1_1. (483 aa)    
Predicted Functional Partners:
LAMI_0E16006G
LAMI_0E16006g1_1.
   
 0.999
LAMI_0F15610G
LAMI_0F15610g1_1.
   
 
 0.994
LAMI_0H16600G
LAMI_0H16600g1_1.
   
 
 0.994
LAMI_0A04346G
LAMI_0A04346g1_1.
   
 0.990
LAMI_0E08636G
LAMI_0E08636g1_1.
   
 
 0.990
LAMI_0G10000G
LAMI_0G10000g1_1.
   
 
 0.985
LAMI_0C09450G
LAMI_0C09450g1_1.
   
 
 0.983
LAMI_0G03488G
LAMI_0G03488g1_1.
   
 0.983
LAMI_0D11870G
LAMI_0D11870g1_1.
   
 0.980
LAMI_0C06304G
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.979
Your Current Organism:
Lachancea mirantina
NCBI taxonomy Id: 1230905
Other names: CBS 11717, L. mirantina, Lachancea mirantina Pereira, Costa, Brasileiro, Rosa & Morais, 2011, Lachancea sp. CBS 11717, Lachancea sp. PJ-2012b, URM 5925
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.