STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L248_0186Putative ABC transporter ATP-binding protein. (582 aa)    
Predicted Functional Partners:
L248_0185
Putative ABC transporter ATP-binding protein.
 
 
0.933
artM
ArtM.
 
     
0.899
pstB-2
PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.899
artM-2
ArtM.
 
     
0.899
ftsE
FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
     
0.889
ybbL
YbbL.
 
     
0.872
L248_1103
ATP-binding cassette sub-family B member 5.
 
    
0.858
L248_3032
Putative ABC transporter ATP-binding protein.
 
 
0.804
L248_0084
ATP-binding cassette sub-family B member 5.
 
 
0.800
L248_0474
Hypothetical protein.
 
 
0.799
Your Current Organism:
Lactobacillus shenzhenensis
NCBI taxonomy Id: 1231336
Other names: L. shenzhenensis LY-73, Lactobacillus shenzhenensis KACC 16878, Lactobacillus shenzhenensis LY-73, Lactobacillus sp. KACC 16878
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