Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| L248_1393 | L248_1395 | L248_1393 | L248_1395 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Hypothetical protein. | 0.773 |
| L248_1393 | L248_1398 | L248_1393 | L248_1398 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DNA polymerase III subunit delta'. | 0.947 |
| L248_1393 | L248_1399 | L248_1393 | L248_1399 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Initiation-control protein yabA; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.695 |
| L248_1393 | L248_1401 | L248_1393 | L248_1401 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Oleoyl-[acyl-carrier-protein] hydrolase. | 0.695 |
| L248_1393 | dnaX | L248_1393 | L248_1392 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | DnaX; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.928 |
| L248_1393 | recR | L248_1393 | L248_1394 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.996 |
| L248_1393 | rsmI | L248_1393 | L248_1400 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | RsmI; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.836 |
| L248_1393 | tmk | L248_1393 | L248_1396 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | Tmk; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.941 |
| L248_1393 | yaaQ | L248_1393 | L248_1397 | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | YaaQ. | 0.722 |
| L248_1395 | L248_1393 | L248_1395 | L248_1393 | Hypothetical protein. | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.773 |
| L248_1395 | L248_1398 | L248_1395 | L248_1398 | Hypothetical protein. | DNA polymerase III subunit delta'. | 0.511 |
| L248_1395 | L248_1399 | L248_1395 | L248_1399 | Hypothetical protein. | Initiation-control protein yabA; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.478 |
| L248_1395 | L248_1401 | L248_1395 | L248_1401 | Hypothetical protein. | Oleoyl-[acyl-carrier-protein] hydrolase. | 0.478 |
| L248_1395 | dnaX | L248_1395 | L248_1392 | Hypothetical protein. | DnaX; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.773 |
| L248_1395 | recR | L248_1395 | L248_1394 | Hypothetical protein. | RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.773 |
| L248_1395 | rsmI | L248_1395 | L248_1400 | Hypothetical protein. | RsmI; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.478 |
| L248_1395 | tmk | L248_1395 | L248_1396 | Hypothetical protein. | Tmk; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.580 |
| L248_1395 | yaaQ | L248_1395 | L248_1397 | Hypothetical protein. | YaaQ. | 0.511 |
| L248_1398 | L248_1393 | L248_1398 | L248_1393 | DNA polymerase III subunit delta'. | Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. | 0.947 |
| L248_1398 | L248_1395 | L248_1398 | L248_1395 | DNA polymerase III subunit delta'. | Hypothetical protein. | 0.511 |
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