STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L248_1724Hypothetical protein. (318 aa)    
Predicted Functional Partners:
L248_1723
Hypothetical protein.
 
 
 0.998
L248_1725
Competence protein ComGC.
 
  
 0.980
L248_0198
Hypothetical protein.
 
  
 0.888
pilD
Leader peptidase (prepilin peptidase) / N-methyltransferase.
 
  
 0.843
L248_0197
DNA uptake protein and related DNA-binding proteins.
  
  
 0.737
L248_1279
Hypothetical protein; Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein).
   
  
 0.689
L248_1280
Hypothetical protein.
 
  
 0.631
L248_1729
Site-specific DNA-methyltransferase (adenine-specific).
 
     0.628
ezrA
Hypothetical protein; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.577
ftsA
FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
  
  
 0.547
Your Current Organism:
Lactobacillus shenzhenensis
NCBI taxonomy Id: 1231336
Other names: L. shenzhenensis LY-73, Lactobacillus shenzhenensis KACC 16878, Lactobacillus shenzhenensis LY-73, Lactobacillus sp. KACC 16878
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.