STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L248_2172Hypothetical protein; Acetyltransferases, including N-acetylases of ribosomal proteins. (177 aa)    
Predicted Functional Partners:
L248_0959
Hypothetical protein.
    
  0.849
L248_0531
Hypothetical protein.
 
 
   0.596
L248_0532
Hypothetical protein.
   
   0.538
L248_1942
Hypothetical protein.
 
  
  0.525
speC
SpeC.
 
  
  0.524
L248_2171
Hypothetical protein.
 
     0.517
L248_3041
Streptomycin 3'-adenylyltransferase; Mediates bacterial resistance to the antibiotics streptomycin and spectomycin.
  
     0.497
L248_0387
Diamine N-acetyltransferase.
 
 
 0.489
L248_2817
Hypothetical protein.
  
  
 0.476
pqrA
PqrA.
  
 
 0.451
Your Current Organism:
Lactobacillus shenzhenensis
NCBI taxonomy Id: 1231336
Other names: L. shenzhenensis LY-73, Lactobacillus shenzhenensis KACC 16878, Lactobacillus shenzhenensis LY-73, Lactobacillus sp. KACC 16878
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.