STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L248_2755Hypothetical protein. (282 aa)    
Predicted Functional Partners:
bglP
BglP.
  
 
 0.955
scrA
ScrA.
  
 
 0.955
L248_3176
Crr.
  
 
 0.955
L248_3177
PTS system, beta-glucosides-specific IIA component.
  
 
 0.955
ptsG
PtsG.
  
 
 0.716
yqeC
YqeC.
 
   
 0.656
gntK
GntK; Belongs to the FGGY kinase family.
 
     0.598
L248_2984
2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase.
 
  
 0.543
L248_2771
Pmi; Belongs to the mannose-6-phosphate isomerase type 1 family.
  
 
 0.540
murQ
MurQ; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.532
Your Current Organism:
Lactobacillus shenzhenensis
NCBI taxonomy Id: 1231336
Other names: L. shenzhenensis LY-73, Lactobacillus shenzhenensis KACC 16878, Lactobacillus shenzhenensis LY-73, Lactobacillus sp. KACC 16878
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.