STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L248_2879Hypothetical protein; Response regulator containing CheY-like receiver and SARP domains. (477 aa)    
Predicted Functional Partners:
yesM-3
Two-component system, sensor histidine kinase YesM.
 
 
 0.973
yesM
Two-component system, sensor histidine kinase YesM.
 
 
 0.889
L248_2882
Hypothetical protein; ABC-type sugar transport system, periplasmic component.
 
     0.876
lplC
LplC.
 
     0.847
L248_2884
Hypothetical protein; ABC-type polysaccharide transport system, permease component.
 
     0.844
yesM-2
Two-component system, sensor histidine kinase YesM.
 
 0.809
L248_0547
Hypothetical protein.
 
 
 0.779
L248_2881
Hypothetical protein.
  
    0.776
L248_0577
Hypothetical protein; ABC-type sugar transport system, periplasmic component.
  
     0.769
L248_0570
Alpha-mannosidase.
  
     0.761
Your Current Organism:
Lactobacillus shenzhenensis
NCBI taxonomy Id: 1231336
Other names: L. shenzhenensis LY-73, Lactobacillus shenzhenensis KACC 16878, Lactobacillus shenzhenensis LY-73, Lactobacillus sp. KACC 16878
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.