STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN63693.1Pesticin receptor. (792 aa)    
Predicted Functional Partners:
GAN64411.1
TonB-dependent outer membrane siderophore receptor.
  
 
 0.821
GAN62053.1
TonB-dependent outer membrane siderophore receptor.
  
  
  0.805
GAN64599.1
TonB-dependent receptor.
  
  
  0.789
GAN62756.1
Outer membrane protein OmpA.
  
  
  0.704
GAN62792.1
Outer membrane protein OmpA.
  
  
  0.704
GAN62994.1
Two component sensor histidine kinase FecR/PupR.
  
    0.687
GAN62724.1
Peptidase.
  
     0.683
GAN64448.1
anti-FecI sigma factor FecR.
  
    0.673
GAN64073.1
TonB-dependent ferrichrome siderophore receptor.
  
  
  0.657
GAN64413.1
Outer membrane siderophore receptor.
  
 
  0.631
Your Current Organism:
Acetobacter indonesiensis
NCBI taxonomy Id: 1231340
Other names: A. indonesiensis 5H-1, Acetobacter indonesiensis 5H-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.