STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_0151Hypothetical protein. (276 aa)    
Predicted Functional Partners:
rpmA
Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
       0.621
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.610
OCGS_1874
Membrane protein.
  
     0.602
OCGS_2039
Tellurite resistance protein.
  
     0.594
OCGS_1839
Rhomboid family protein.
  
     0.589
OCGS_1154
Hypothetical protein.
  
     0.574
OCGS_1914
Hypothetical protein.
  
     0.568
OCGS_0152
Hypothetical protein.
 
     0.566
OCGS_0655
Hypothetical protein.
  
     0.565
OCGS_1558
Hypothetical protein.
  
     0.532
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.