STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_0269Putative dioxygenase. (305 aa)    
Predicted Functional Partners:
OCGS_0270
Maleylacetate reductase.
  
 0.999
OCGS_0276
FAD binding domain protein.
 
  
 0.936
OCGS_2793
Dienelactone hydrolase.
   
 
 0.873
OCGS_0268
Hypothetical protein.
 
   
 0.812
aroQ
AroQ; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
 
      0.738
OCGS_0671
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.700
OCGS_1400
Hypothetical protein.
  
 
 0.688
OCGS_2838
Hypothetical protein.
    
 0.676
OCGS_0366
Oxidoreductase FAD-binding domain-containing protein.
  
 
 0.639
OCGS_2676
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.639
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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