STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_0790Oxidoreductase, short-chain dehydrogenase/reductase family protein. (214 aa)    
Predicted Functional Partners:
surE
Acid phosphatase SurE, putative; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.729
OCGS_0792
Hypothetical protein.
 
     0.727
pcm
protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
       0.724
OCGS_1314
Short-chain dehydrogenase/reductase SDR.
  
  
  0.715
OCGS_0791
Hydrolase, nudix family.
 
     0.663
OCGS_2744
Short chain dehydrogenase family protein.
  
  
  0.660
OCGS_1940
Short-chain dehydrogenase/reductase SDR.
  
  
  0.599
OCGS_2212
D-beta-hydroxybutyrate dehydrogenase.
  
  
  0.599
OCGS_0787
LysM domain/M23/M37 peptidase.
  
    0.580
OCGS_1349
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.576
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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