STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_0803Oxidoreductase, short-chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (214 aa)    
Predicted Functional Partners:
OCGS_1409
Hypothetical protein.
    
  0.886
OCGS_0804
Hypothetical protein.
       0.762
OCGS_0805
Hypothetical protein.
       0.726
OCGS_2678
Fused aldehyde dehydrogenase/enoyl-CoA hydratase.
    
 0.714
OCGS_0801
Putative permease FtsX.
       0.586
OCGS_0802
ABC transporter, ATPase subunit.
       0.586
OCGS_1804
Putative ketoacyl reductase.
  
 
  0.580
OCGS_2744
Short chain dehydrogenase family protein.
  
 
  0.564
OCGS_1940
Short-chain dehydrogenase/reductase SDR.
  
 
  0.518
OCGS_0800
Hypothetical protein.
       0.516
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.