STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_0908Tripartite AtP-independent periplasmic transporter subunit DctQ. (190 aa)    
Predicted Functional Partners:
OCGS_0909
Hypothetical protein.
 
 
  0.995
OCGS_0907
TRAP dicarboxylate transporter, DctM subunit.
 
 
  0.983
OCGS_0905
TRAP dicarboxylate family transporter, DctP subunit.
 
 
  0.973
OCGS_0906
Trap dicarboxylate family transporter, dctq subunit.
 
 
  0.964
OCGS_2555
Putative permease component of C4 dicarboxylatetransporter.
 
    0.797
OCGS_0922
Hypothetical protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.782
OCGS_2556
TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.781
OCGS_0910
Hypothetical protein.
       0.752
OCGS_0911
Glycosyl transferase.
       0.752
OCGS_0912
Putative glycosyltransferase.
       0.752
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.