STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_1099ABC transporter, permease protein. (840 aa)    
Predicted Functional Partners:
OCGS_1100
ABC transporter related precursor.
 
     0.951
OCGS_1101
Lipolytic protein.
 
     0.930
OCGS_0800
Hypothetical protein.
  
    0.707
OCGS_0539
Lipoprotein releasing system ATP-binding protein.
  
 
 0.562
OCGS_0802
ABC transporter, ATPase subunit.
  
 
 0.562
OCGS_1102
FAD linked oxidase domain protein.
       0.511
OCGS_0076
Hypothetical protein.
  
     0.448
OCGS_1103
FAD linked oxidase-like protein.
       0.439
OCGS_1320
Hypothetical protein.
  
     0.429
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.