STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_1317Peptidase, M48 family, putative. (241 aa)    
Predicted Functional Partners:
ribB
Hypothetical protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.744
OCGS_1318
Hypothetical protein.
       0.651
OCGS_1254
Hypothetical protein.
  
     0.640
OCGS_1319
Nitroreductase family protein.
       0.574
OCGS_0010
Hypothetical protein.
  
     0.547
OCGS_1320
Hypothetical protein.
       0.547
OCGS_2239
Hypothetical protein.
  
    0.531
OCGS_0369
Antifreeze protein, type I.
  
     0.477
OCGS_0572
TPR domain-containing protein.
    
 0.470
OCGS_0060
Hypothetical protein.
  
     0.427
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.