STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_1345Putative glycosyl transferase. (336 aa)    
Predicted Functional Partners:
OCGS_1362
Hypothetical protein.
 
    0.843
OCGS_1359
Putative glycosyltransferase.
 
  
 0.791
OCGS_1344
Hypothetical protein.
       0.752
OCGS_0911
Glycosyl transferase.
 
  
  0.706
OCGS_1366
Putative cell surface polysaccharide export ABC-2 transporter permease protein.
 
  
 0.643
OCGS_1343
Ribonuclease III.
 
     0.615
OCGS_1365
Putative polysaccharide export-assoiated protein.
 
     0.561
OCGS_1342
Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.539
OCGS_1986
Sugar transferase.
 
 
 0.493
OCGS_1983
Polysaccharide biosynthesis protein CapD.
  
 
 0.477
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.