STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_1346Penicillin-binding protein. (729 aa)    
Predicted Functional Partners:
OCGS_0424
Cell division protein FtsI/penicillin-binding protein 2.
 
 
0.962
OCGS_0830
Penicillin-binding protein 1A.
 
 
0.933
OCGS_1019
Penicillin-binding protein 1C.
  
  
 
0.885
OCGS_0499
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
   
 
 0.873
OCGS_1311
D-alanyl-D-alanine carboxypeptidase family protein; Belongs to the peptidase S11 family.
  
 0.862
OCGS_1873
Penicillin-binding protein 2.
  
 
 0.818
OCGS_0432
Cell division protein FtsW; Belongs to the SEDS family.
  
 
 
 0.808
OCGS_0634
Sporulation domain protein.
  
 
   0.786
mltG
Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
  
   
 0.776
OCGS_1560
Peptidase, M23/M37 family protein.
  
     0.709
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.