STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_1428DNA-binding response regulator PetR. (253 aa)    
Predicted Functional Partners:
OCGS_1420
Signal transduction histidine kinase.
 
 0.993
OCGS_1466
Hypothetical protein.
0.993
OCGS_1709
Sensory box sensor histidine kinase/response regulator.
 0.989
OCGS_1021
Cytoplasmic sensor hybrid histidine kinase.
 0.986
OCGS_1736
GAF protein.
 
 0.982
OCGS_0378
Hypothetical protein.
 0.974
OCGS_0143
Hypothetical protein.
   
 0.892
OCGS_2261
Multi-sensor hybrid histidine kinase.
 
 0.810
OCGS_1427
Transcriptional regulator.
     
 0.790
OCGS_2480
Periplasmic sensor signal transduction histidine kinase.
 
 0.782
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.