STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_1577Oligopeptide ABC transporter; Belongs to the ABC transporter superfamily. (350 aa)    
Predicted Functional Partners:
OCGS_1581
Peptide/nickel/opine uptake family ABC transporter, permease protein.
 0.992
OCGS_2295
Oligopeptide ABC transporter, permease protein.
 0.991
OCGS_1395
Peptide ABC transporter permease.
 0.988
OCGS_1485
Binding-protein-dependent transport systems inner membrane component.
 0.982
OCGS_2143
ABC transporter, membrane spanning protein (dipeptide).
 0.979
OCGS_1576
Oligopeptide ABC transporter ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
 
 
 
0.974
OCGS_2293
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.939
OCGS_2297
Hypothetical protein.
 
 0.937
OCGS_1578
Oligopeptide-binding protein AppA.
 
 0.936
OCGS_2296
Hypothetical protein.
 
 0.904
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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