STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_1950Dimethyl sulfoxide reductase, C subunit, putative. (292 aa)    
Predicted Functional Partners:
OCGS_1952
Thiosulfate reductase, putative; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.997
OCGS_1951
4Fe-4S binding domain protein.
 
 
 0.995
OCGS_1449
4Fe-4S ferredoxin, iron-sulfur binding protein.
  
 0.886
OCGS_0779
Hypothetical protein.
    
 0.882
OCGS_1883
Putative molybdopterin-binding oxidoreductase.
     
 0.875
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.758
OCGS_1954
Phosphate acetyltransferase.
       0.708
OCGS_1955
Tpa; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.706
OCGS_0366
Oxidoreductase FAD-binding domain-containing protein.
    
  0.695
OCGS_2676
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
    
  0.695
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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