STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_2142ABC di/oligopeptide transporter, ATPase subunit; Belongs to the ABC transporter superfamily. (325 aa)    
Predicted Functional Partners:
OCGS_2143
ABC transporter, membrane spanning protein (dipeptide).
  
  0.997
OCGS_2295
Oligopeptide ABC transporter, permease protein.
 
  
  0.987
OCGS_1395
Peptide ABC transporter permease.
 
  
  0.981
OCGS_2144
Putative dipeptide permease component of ABC transporter.
  
  0.978
OCGS_1581
Peptide/nickel/opine uptake family ABC transporter, permease protein.
 
  
  0.974
OCGS_1485
Binding-protein-dependent transport systems inner membrane component.
 
  
  0.965
OCGS_2146
ABC peptide transporter, periplasmic binding protein.
  
  0.956
OCGS_2141
Dipeptide transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.952
OCGS_1063
Nitrous oxide maturation protein NosY.
  
 0.948
ugpC
TOBE domain family; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
   
 
0.909
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.