STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_2151Hypothetical protein; Belongs to the LDH2/MDH2 oxidoreductase family. (342 aa)    
Predicted Functional Partners:
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
     
 0.890
OCGS_0944
Aromatic-amino-acid aminotransferase.
     
 0.874
OCGS_1483
Dipeptidase AC.
  
    0.866
OCGS_0127
Aspartate aminotransferase.
     
 0.857
OCGS_1146
NAD dependent malic enzyme.
    
 0.821
OCGS_2620
Malic enzyme.
    
 0.821
OCGS_1977
Hypothetical protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.805
OCGS_2627
Hypothetical protein.
 
  
 0.582
OCGS_0343
Membrane-bound PQQ-dependent dehydrogenase.
  
  
  0.540
OCGS_2152
6-phosphogluconate dehydrogenase, decarboxylating.
       0.535
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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