STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_2334Nitrogen-fixing NifU domain protein. (149 aa)    
Predicted Functional Partners:
OCGS_2252
Cysteine desulfurase.
  
 0.999
OCGS_0527
Putative heat shock protein DnaJ.
  
 
 0.995
OCGS_2037
Hypothetical protein.
  
 0.991
OCGS_2245
Cysteine desulfurase, putative; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.991
OCGS_1224
Hypothetical protein.
  
 0.986
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.980
OCGS_2249
Hypothetical protein.
  
  
 0.959
OCGS_2253
Transcriptional regulator, BadM/Rrf2 family protein.
  
  
 0.958
OCGS_2292
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
  
 0.949
OCGS_0366
Oxidoreductase FAD-binding domain-containing protein.
  
 0.925
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.