STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_2421Hypothetical protein. (179 aa)    
Predicted Functional Partners:
OCGS_2422
Hypothetical protein.
 
    0.968
OCGS_2420
Hypothetical protein.
       0.785
OCGS_2418
Hypothetical protein.
       0.776
OCGS_2419
Hypothetical protein.
       0.773
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
       0.761
OCGS_1131
Peptidoglycan binding domain protein.
  
     0.752
OCGS_0005
Phasin, PhaP.
  
     0.744
OCGS_2416
Cytochrome C biogenesis protein; Possible subunit of a heme lyase.
       0.744
OCGS_2417
Cytochrome c-type biogenesis protein CcmF.
       0.744
OCGS_0500
Sporulation domain-containing protein.
  
     0.738
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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