STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_2793Dienelactone hydrolase. (253 aa)    
Predicted Functional Partners:
OCGS_0270
Maleylacetate reductase.
  
 
 0.885
OCGS_0269
Putative dioxygenase.
   
 
 0.873
OCGS_1651
Lipase, putative.
 
 
 0.643
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.577
OCGS_1309
Hypothetical protein.
     
 0.539
OCGS_1101
Lipolytic protein.
     
 0.526
OCGS_2794
Hypothetical protein.
       0.509
OCGS_0688
Hypothetical protein.
   
 
  0.471
OCGS_1110
AMP-dependent synthetase and ligase.
   
 
  0.445
OCGS_2792
Hypothetical protein.
       0.428
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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