STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_2838Hypothetical protein. (542 aa)    
Predicted Functional Partners:
OCGS_2839
Metallo-beta-lactamase family protein.
    0.984
OCGS_2837
Hypothetical protein.
 
    0.958
OCGS_2836
Maleylacetoacetate isomerase (glutathione transferase zeta 1) protein.
 
     0.878
OCGS_2646
Homogentisate 1,2-dioxygenase.
 
  
 0.732
OCGS_2840
Fumarylacetoacetase.
 
    0.719
OCGS_2835
Nitroreductase.
  
    0.711
OCGS_2676
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
  
 0.696
OCGS_0269
Putative dioxygenase.
    
 0.676
OCGS_2647
Transcriptional regulator, MarR family.
 
    0.662
OCGS_0366
Oxidoreductase FAD-binding domain-containing protein.
     
 0.640
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.