STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN52883.1Murein transglycosylase. (450 aa)    
Predicted Functional Partners:
GAN53201.1
Hypothetical protein.
     0.711
GAN55295.1
Hypothetical protein.
     0.701
GAN52881.1
Hypothetical protein.
       0.682
GAN52882.1
Peroxiredoxin.
       0.682
GAN55691.1
Hypothetical protein.
  
     0.663
GAN55693.1
Hypothetical protein.
  
     0.655
GAN55696.1
Hypothetical protein.
  
     0.653
GAN55692.1
Hypothetical protein.
  
     0.636
GAN55298.1
Conjugal transfer protein TraF.
 
     0.632
GAN55297.1
Hypothetical protein.
 
     0.618
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.