STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN53096.1Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (335 aa)    
Predicted Functional Partners:
GAN53097.1
Ferrichrome ABC transporter ATP-binding protein.
 0.999
GAN53095.1
Ferrichrome transporter substrate-binding periplasmic protein.
 
 0.997
GAN53908.1
Iron ABC transporter ATP-binding protein.
 0.996
GAN55679.1
ABC-type Fe3+ transport system periplasmic component.
 
 0.989
GAN53093.1
TonB-dependent receptor of ferrichrome transport system.
 
    0.790
GAN53098.1
Hypothetical protein.
       0.757
GAN53099.1
Hypothetical protein.
       0.757
GAN53094.1
Hypothetical protein.
       0.550
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.