STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN53241.1Transporter protein. (465 aa)    
Predicted Functional Partners:
GAN55827.1
HlyD family secretion protein.
 
   0.774
GAN53240.1
Carboxymethylenebutenolidase.
       0.773
GAN55836.1
Major facilitator superfamily MFS_1.
  
     0.772
GAN55749.1
Multidrug resistance protein A.
 
   0.760
GAN53239.1
Galactose-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.741
GAN53560.1
Sugar transport protein.
  
     0.490
GAN54599.1
Hypothetical protein.
  
   0.461
GAN53238.1
Gluconate permease.
       0.430
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.