STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN53456.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
GAN53457.1
HAD family hydrolase.
       0.572
GAN52903.1
Malto-oligosyltrehalose trehalohydrolase.
  
    0.540
GAN53447.1
Hypothetical protein.
  
     0.496
GAN52906.1
Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
   
    0.470
glgA
Glycogen/starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.457
GAN53460.1
Hypothetical protein.
 
    0.452
GAN53558.1
Dehydrogenases and related proteins.
  
     0.434
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.