STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN53922.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
GAN53757.1
Hypothetical protein.
  
  
 0.714
GAN53870.1
Hypothetical protein.
  
     0.671
GAN55442.1
Hypothetical protein.
 
    0.630
GAN54312.1
TonB-dependent receptor.
  
     0.619
GAN55638.1
Abortive infection protein.
  
     0.584
GAN53779.1
acyl-CoA synthetase.
    
 0.573
GAN52754.1
L-amino-acid oxidase.
     
 0.566
aroB
Bifunctional shikimate kinase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
     
 0.559
GAN55570.1
Hypothetical protein.
  
     0.552
GAN53574.1
Hypothetical protein.
  
   
 0.550
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.