STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN54537.1Sucrose isomerase. (583 aa)    
Predicted Functional Partners:
GAN52755.1
Amino acid permease.
    
 0.955
GAN53375.1
Amino acid permease-associated protein.
    
 0.955
GAN54780.1
Amino acid permease-associated protein.
    
 0.955
GAN54952.1
Amino acid permease.
    
 0.955
GAN52903.1
Malto-oligosyltrehalose trehalohydrolase.
 
 
0.887
GAN52902.1
Malto-oligosyltrehalose synthase.
 
 
 0.859
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.852
GAN54556.1
HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 
 0.849
GAN52906.1
Glycogen debranching enzyme GlgX; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.842
glgA
Glycogen/starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 
 0.726
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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